{"id":694,"date":"2013-05-03T14:06:38","date_gmt":"2013-05-03T13:06:38","guid":{"rendered":"http:\/\/blopig.com\/blog\/?p=694"},"modified":"2013-05-03T14:07:45","modified_gmt":"2013-05-03T13:07:45","slug":"publication-memoir-template-based-structure-prediction-for-membrane-proteins","status":"publish","type":"post","link":"https:\/\/www.blopig.com\/blog\/2013\/05\/publication-memoir-template-based-structure-prediction-for-membrane-proteins\/","title":{"rendered":"[Publication] Memoir: template-based structure prediction for membrane proteins"},"content":{"rendered":"<p><span style=\"line-height: 1.714285714; font-size: 1rem;\">Congratulations to all involved in the <a title=\"Memoir NAR publication\" href=\"http:\/\/nar.oxfordjournals.org\/cgi\/content\/full\/gkt331?ijkey=QheNzl3rLmCWL8n&amp;keytype=ref\" target=\"_blank\">Memoir publication<\/a> in Nucleic Acids Research!\u00a0<\/span><\/p>\n<p>Memoir is a web server which builds homology models for membrane proteins. \u00a0It is a web-enabled workflow combining some of <a title=\"OPIG web servers list\" href=\"http:\/\/opig.stats.ox.ac.uk\/\" target=\"_blank\">OPIG&#8217;s software<\/a>; MP-T, IMembrane, Medeller &amp; Fread. \u00a0The inputs are a sequence of the membrane protein you wish to model (target) and a PDB file to use as template.<\/p>\n<p>Memoir may be found <a title=\"Memoir\" href=\"http:\/\/opig.stats.ox.ac.uk\/webapps\/memoir\/php\/index.php\" target=\"_blank\">here<\/a> and there is also a video\u00a0<a href=\"http:\/\/opig.stats.ox.ac.uk\/webapps\/memoir\/tutorial\/video\/memoir_tutorial_jh.swf\" target=\"_blank\">tutorial<\/a>\u00a0narrated by <a href=\"http:\/\/www.stats.ox.ac.uk\/~hill\/About_me.html\" target=\"_blank\">Jamie<\/a>. \u00a0There is even a <a title=\"outtake\" href=\"http:\/\/opig.stats.ox.ac.uk\/webapps\/memoir\/tutorial\/video\/blooper.swf\" target=\"_blank\">funny blooper of him<\/a> practising, which I kept to celebrate this moment.<\/p>\n<p>Happy modelling!<\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Congratulations to all involved in the Memoir publication in Nucleic Acids Research!\u00a0 Memoir is a web server which builds homology models for membrane proteins. \u00a0It is a web-enabled workflow combining some of OPIG&#8217;s software; MP-T, IMembrane, Medeller &amp; Fread. \u00a0The inputs are a sequence of the membrane protein you wish to model (target) and a [&hellip;]<\/p>\n","protected":false},"author":6,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"nf_dc_page":"","wikipediapreview_detectlinks":true,"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"ngg_post_thumbnail":0,"_jetpack_memberships_contains_paid_content":false,"footnotes":""},"categories":[48],"tags":[],"ppma_author":[40],"class_list":["post-694","post","type-post","status-publish","format-standard","hentry","category-publication"],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"authors":[{"term_id":40,"user_id":0,"is_guest":1,"slug":"cap-jp","display_name":"jp","avatar_url":"https:\/\/secure.gravatar.com\/avatar\/?s=96&d=mm&r=g","0":null,"1":"","2":"","3":"","4":"","5":"","6":"","7":"","8":""}],"_links":{"self":[{"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/posts\/694","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/users\/6"}],"replies":[{"embeddable":true,"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/comments?post=694"}],"version-history":[{"count":2,"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/posts\/694\/revisions"}],"predecessor-version":[{"id":696,"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/posts\/694\/revisions\/696"}],"wp:attachment":[{"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/media?parent=694"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/categories?post=694"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/tags?post=694"},{"taxonomy":"author","embeddable":true,"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/ppma_author?post=694"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}