{"id":2249,"date":"2014-11-17T16:47:41","date_gmt":"2014-11-17T16:47:41","guid":{"rendered":"http:\/\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png"},"modified":"2014-11-17T16:47:41","modified_gmt":"2014-11-17T16:47:41","slug":"ribosome_profiling","status":"inherit","type":"attachment","link":"https:\/\/www.blopig.com\/blog\/2014\/11\/how-do-we-measure-translation-speed\/ribosome_profiling\/","title":{"rendered":"Ribosome Profiling"},"author":25,"featured_media":0,"comment_status":"open","ping_status":"open","template":"","meta":{"nf_dc_page":"","wikipediapreview_detectlinks":true,"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"ngg_post_thumbnail":0},"class_list":["post-2249","attachment","type-attachment","status-inherit","hentry"],"jetpack_sharing_enabled":true,"description":{"rendered":"<p class=\"attachment\"><a href=\"https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?ssl=1\"><img decoding=\"async\" loading=\"lazy\" width=\"188\" height=\"300\" src=\"https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?fit=188%2C300&amp;ssl=1\" class=\"attachment-medium size-medium\" alt=\"\" srcset=\"https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?w=3155&amp;ssl=1 3155w, https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?resize=188%2C300&amp;ssl=1 188w, https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?resize=643%2C1024&amp;ssl=1 643w, https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?resize=624%2C993&amp;ssl=1 624w, https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?w=1250&amp;ssl=1 1250w, https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?w=1875&amp;ssl=1 1875w\" sizes=\"auto, (max-width: 188px) 100vw, 188px\" \/><\/a><\/p>\n"},"caption":{"rendered":"<p>A simplified schematic of ribosome profiling. Ribosome profiling begins with separating a cell\u2019s polysomes (mRNA with ribosomes attached) from its lysate. Erosion by nuclease digestion removes all mRNA not shielded by a ribosome while also cleaving ribosomes<br \/>\nattached to the same mRNA strand. Subsequent removal of the ribosomes leaves behind<br \/>\nonly the mRNA fragments which were undergoing translation at the point of cell lysis. Mapping these fragments back to the genome gives a codon-level resolution transcriptome-wide<br \/>\noverview of the translation occurring within the cell. From this we can infer the optimality<br \/>\nassociated with any given codon from any given gene.<\/p>\n"},"alt_text":"","media_type":"image","mime_type":"image\/png","media_details":{"width":3155,"height":5021,"file":"2014\/11\/ribosome_profiling.png","sizes":{"thumbnail":{"file":"ribosome_profiling-150x150.png","width":150,"height":150,"mime_type":"image\/png","source_url":"https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?resize=150%2C150&ssl=1"},"medium":{"file":"ribosome_profiling-188x300.png","width":188,"height":300,"mime_type":"image\/png","source_url":"https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?fit=188%2C300&ssl=1"},"large":{"file":"ribosome_profiling-643x1024.png","width":643,"height":1024,"mime_type":"image\/png","source_url":"https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?fit=625%2C995&ssl=1"},"post-thumbnail":{"file":"ribosome_profiling-624x993.png","width":624,"height":993,"mime_type":"image\/png","source_url":"https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?fit=624%2C993&ssl=1"},"full":{"file":"ribosome_profiling.png?fit=3155%2C5021&ssl=1","width":3155,"height":5021,"mime_type":"image\/png","source_url":"https:\/\/i0.wp.com\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png?fit=3155%2C5021&ssl=1"}},"image_meta":{"aperture":0,"credit":"","camera":"","caption":"","created_timestamp":0,"copyright":"","focal_length":0,"iso":0,"shutter_speed":0,"title":""}},"post":2248,"source_url":"https:\/\/www.blopig.com\/blog\/wp-content\/uploads\/2014\/11\/ribosome_profiling.png","_links":{"self":[{"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/media\/2249","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/media"}],"about":[{"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/types\/attachment"}],"author":[{"embeddable":true,"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/users\/25"}],"replies":[{"embeddable":true,"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/comments?post=2249"}],"wp:attached-to":[{"embeddable":true,"post_type":"post","id":2248,"href":"https:\/\/www.blopig.com\/blog\/wp-json\/wp\/v2\/posts\/2248"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}